Show or Hide Protein Colors

How do I show or hide custom colors in a protein sequence?

Click the "Show colors" Button

To display custom colors, click  the "Show colors" button in the side toolbar.

To learn how to add custom colors to a protein sequence, see Customize Protein Sequence Colors.

Alternatively, you can access the same control by clicking View → Map & Sequence Options....

In the "Map & Sequence Options" dialog, click the "Show colors" button, then click OK.

View the Sequence Colors

Any colored amino acids will now be shown in Map and Sequence views.